Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIR97660.1 | AIS01104.1 | SGLAU_08240 | SGLAU_25830 | Magnesium-chelatase subunit. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.955 |
AIR97660.1 | hemA | SGLAU_08240 | SGLAU_19165 | Magnesium-chelatase subunit. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.511 |
AIR97660.1 | hemC1 | SGLAU_08240 | SGLAU_19170 | Magnesium-chelatase subunit. | Porphobilinogen deaminase 1; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.631 |
AIR97660.1 | hemE | SGLAU_08240 | SGLAU_25805 | Magnesium-chelatase subunit. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.533 |
AIR97660.1 | hemH | SGLAU_08240 | SGLAU_25225 | Magnesium-chelatase subunit. | Putative ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.947 |
AIR97660.1 | hemL | SGLAU_08240 | SGLAU_19410 | Magnesium-chelatase subunit. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.452 |
AIR98722.1 | AIS01104.1 | SGLAU_13660 | SGLAU_25830 | Hypothetical protein. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.804 |
AIS01102.1 | AIS01103.1 | SGLAU_25820 | SGLAU_25825 | CoA-disulfide reductase. | Lipoprotein. | 0.839 |
AIS01102.1 | AIS01104.1 | SGLAU_25820 | SGLAU_25830 | CoA-disulfide reductase. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.747 |
AIS01102.1 | AIS01105.1 | SGLAU_25820 | SGLAU_25835 | CoA-disulfide reductase. | Hypothetical protein. | 0.751 |
AIS01103.1 | AIS01102.1 | SGLAU_25825 | SGLAU_25820 | Lipoprotein. | CoA-disulfide reductase. | 0.839 |
AIS01103.1 | AIS01104.1 | SGLAU_25825 | SGLAU_25830 | Lipoprotein. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.845 |
AIS01103.1 | AIS01105.1 | SGLAU_25825 | SGLAU_25835 | Lipoprotein. | Hypothetical protein. | 0.771 |
AIS01104.1 | AIR97660.1 | SGLAU_25830 | SGLAU_08240 | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | Magnesium-chelatase subunit. | 0.955 |
AIS01104.1 | AIR98722.1 | SGLAU_25830 | SGLAU_13660 | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | Hypothetical protein. | 0.804 |
AIS01104.1 | AIS01102.1 | SGLAU_25830 | SGLAU_25820 | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | CoA-disulfide reductase. | 0.747 |
AIS01104.1 | AIS01103.1 | SGLAU_25830 | SGLAU_25825 | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | Lipoprotein. | 0.845 |
AIS01104.1 | AIS01105.1 | SGLAU_25830 | SGLAU_25835 | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | Hypothetical protein. | 0.925 |
AIS01104.1 | hemA | SGLAU_25830 | SGLAU_19165 | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.739 |
AIS01104.1 | hemC1 | SGLAU_25830 | SGLAU_19170 | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | Porphobilinogen deaminase 1; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.626 |
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