Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIR98426.1 | AIS01168.1 | SGLAU_12145 | SGLAU_26150 | 4-alpha-glucanotransferase. | Malto-oligosyltrehalose synthase. | 0.961 |
AIR98426.1 | amy | SGLAU_12145 | SGLAU_10130 | 4-alpha-glucanotransferase. | Alpha-amylase. | 0.913 |
AIR98426.1 | gacE2 | SGLAU_12145 | SGLAU_00940 | 4-alpha-glucanotransferase. | Putative alpha-amylase. | 0.913 |
AIR98426.1 | gacQ | SGLAU_12145 | SGLAU_01030 | 4-alpha-glucanotransferase. | Putative 4-alpha-glucanotransferase. | 0.903 |
AIR98426.1 | glgB1 | SGLAU_12145 | SGLAU_23355 | 4-alpha-glucanotransferase. | 1,4-alpha-glucan branching enzyme GlgB 1; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.977 |
AIR98426.1 | glgB2 | SGLAU_12145 | SGLAU_02545 | 4-alpha-glucanotransferase. | 1,4-alpha-glucan branching enzyme GlgB 2; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.977 |
AIR98426.1 | glgP | SGLAU_12145 | SGLAU_23375 | 4-alpha-glucanotransferase. | Glycogen phosphorylase. | 0.976 |
AIR98426.1 | glgX3 | SGLAU_12145 | SGLAU_26155 | 4-alpha-glucanotransferase. | GlgX-like protein; Belongs to the glycosyl hydrolase 13 family. | 0.990 |
AIR98426.1 | treS1 | SGLAU_12145 | SGLAU_02535 | 4-alpha-glucanotransferase. | Trehalose synthase. | 0.948 |
AIR98426.1 | treS2 | SGLAU_12145 | SGLAU_23365 | 4-alpha-glucanotransferase. | Trehalose synthase. | 0.948 |
AIS01168.1 | AIR98426.1 | SGLAU_26150 | SGLAU_12145 | Malto-oligosyltrehalose synthase. | 4-alpha-glucanotransferase. | 0.961 |
AIS01168.1 | amy | SGLAU_26150 | SGLAU_10130 | Malto-oligosyltrehalose synthase. | Alpha-amylase. | 0.915 |
AIS01168.1 | gacE2 | SGLAU_26150 | SGLAU_00940 | Malto-oligosyltrehalose synthase. | Putative alpha-amylase. | 0.915 |
AIS01168.1 | gacQ | SGLAU_26150 | SGLAU_01030 | Malto-oligosyltrehalose synthase. | Putative 4-alpha-glucanotransferase. | 0.934 |
AIS01168.1 | glgB1 | SGLAU_26150 | SGLAU_23355 | Malto-oligosyltrehalose synthase. | 1,4-alpha-glucan branching enzyme GlgB 1; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.781 |
AIS01168.1 | glgB2 | SGLAU_26150 | SGLAU_02545 | Malto-oligosyltrehalose synthase. | 1,4-alpha-glucan branching enzyme GlgB 2; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.781 |
AIS01168.1 | glgP | SGLAU_26150 | SGLAU_23375 | Malto-oligosyltrehalose synthase. | Glycogen phosphorylase. | 0.768 |
AIS01168.1 | glgX3 | SGLAU_26150 | SGLAU_26155 | Malto-oligosyltrehalose synthase. | GlgX-like protein; Belongs to the glycosyl hydrolase 13 family. | 0.992 |
AIS01168.1 | treS1 | SGLAU_26150 | SGLAU_02535 | Malto-oligosyltrehalose synthase. | Trehalose synthase. | 0.974 |
AIS01168.1 | treS2 | SGLAU_26150 | SGLAU_23365 | Malto-oligosyltrehalose synthase. | Trehalose synthase. | 0.974 |
page 1 of 6