Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIS01421.1 | AIS01422.1 | SGLAU_27415 | SGLAU_27420 | Hypothetical protein. | Hypothetical protein. | 0.763 |
AIS01421.1 | AIS01423.1 | SGLAU_27415 | SGLAU_27425 | Hypothetical protein. | ABC transporter ATP-binding protein. | 0.713 |
AIS01421.1 | AIS01438.1 | SGLAU_27415 | SGLAU_27500 | Hypothetical protein. | Outer membrane protein romA. | 0.525 |
AIS01421.1 | AIS01603.1 | SGLAU_27415 | SGLAU_28330 | Hypothetical protein. | Putative alpha-galactosidase. | 0.603 |
AIS01421.1 | gcvP | SGLAU_27415 | SGLAU_05485 | Hypothetical protein. | Glycine dehydrogenase [decarboxylating]; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.732 |
AIS01422.1 | AIS01421.1 | SGLAU_27420 | SGLAU_27415 | Hypothetical protein. | Hypothetical protein. | 0.763 |
AIS01422.1 | AIS01423.1 | SGLAU_27420 | SGLAU_27425 | Hypothetical protein. | ABC transporter ATP-binding protein. | 0.486 |
AIS01423.1 | AIS01421.1 | SGLAU_27425 | SGLAU_27415 | ABC transporter ATP-binding protein. | Hypothetical protein. | 0.713 |
AIS01423.1 | AIS01422.1 | SGLAU_27425 | SGLAU_27420 | ABC transporter ATP-binding protein. | Hypothetical protein. | 0.486 |
AIS01438.1 | AIS01421.1 | SGLAU_27500 | SGLAU_27415 | Outer membrane protein romA. | Hypothetical protein. | 0.525 |
AIS01603.1 | AIS01421.1 | SGLAU_28330 | SGLAU_27415 | Putative alpha-galactosidase. | Hypothetical protein. | 0.603 |
gcvP | AIS01421.1 | SGLAU_05485 | SGLAU_27415 | Glycine dehydrogenase [decarboxylating]; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Hypothetical protein. | 0.732 |