Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIR97023.1 | AIR97800.1 | SGLAU_04985 | SGLAU_08940 | DNA-binding protein. | Toxin-antitoxin system, toxin component. | 0.760 |
AIR97023.1 | AIR99703.1 | SGLAU_04985 | SGLAU_18715 | DNA-binding protein. | Hypothetical protein. | 0.766 |
AIR97023.1 | AIS01446.1 | SGLAU_04985 | SGLAU_27540 | DNA-binding protein. | Hypothetical protein. | 0.767 |
AIR97023.1 | AIS02001.1 | SGLAU_04985 | SGLAU_30335 | DNA-binding protein. | Hypothetical protein. | 0.772 |
AIR97800.1 | AIR97023.1 | SGLAU_08940 | SGLAU_04985 | Toxin-antitoxin system, toxin component. | DNA-binding protein. | 0.760 |
AIR97800.1 | AIR97801.1 | SGLAU_08940 | SGLAU_08945 | Toxin-antitoxin system, toxin component. | Xre family toxin-antitoxin system, antitoxin component. | 0.969 |
AIR97800.1 | AIR98673.1 | SGLAU_08940 | SGLAU_13415 | Toxin-antitoxin system, toxin component. | Helix-turn-helix domain-containing protein. | 0.759 |
AIR97800.1 | AIR98948.1 | SGLAU_08940 | SGLAU_14825 | Toxin-antitoxin system, toxin component. | DNA-binding protein. | 0.771 |
AIR97800.1 | AIR99705.1 | SGLAU_08940 | SGLAU_18725 | Toxin-antitoxin system, toxin component. | DNA-binding protein. | 0.773 |
AIR97800.1 | AIS01446.1 | SGLAU_08940 | SGLAU_27540 | Toxin-antitoxin system, toxin component. | Hypothetical protein. | 0.878 |
AIR97800.1 | AIS01447.1 | SGLAU_08940 | SGLAU_27545 | Toxin-antitoxin system, toxin component. | Xre family toxin-antitoxin system, antitoxin component. | 0.773 |
AIR97800.1 | AIS02000.1 | SGLAU_08940 | SGLAU_30330 | Toxin-antitoxin system, toxin component. | DNA-binding protein. | 0.772 |
AIR97801.1 | AIR97800.1 | SGLAU_08945 | SGLAU_08940 | Xre family toxin-antitoxin system, antitoxin component. | Toxin-antitoxin system, toxin component. | 0.969 |
AIR97801.1 | AIR99703.1 | SGLAU_08945 | SGLAU_18715 | Xre family toxin-antitoxin system, antitoxin component. | Hypothetical protein. | 0.774 |
AIR97801.1 | AIS01446.1 | SGLAU_08945 | SGLAU_27540 | Xre family toxin-antitoxin system, antitoxin component. | Hypothetical protein. | 0.893 |
AIR97801.1 | AIS02001.1 | SGLAU_08945 | SGLAU_30335 | Xre family toxin-antitoxin system, antitoxin component. | Hypothetical protein. | 0.774 |
AIR98673.1 | AIR97800.1 | SGLAU_13415 | SGLAU_08940 | Helix-turn-helix domain-containing protein. | Toxin-antitoxin system, toxin component. | 0.759 |
AIR98673.1 | AIR99703.1 | SGLAU_13415 | SGLAU_18715 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.763 |
AIR98673.1 | AIS01446.1 | SGLAU_13415 | SGLAU_27540 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.757 |
AIR98673.1 | AIS02001.1 | SGLAU_13415 | SGLAU_30335 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.769 |
page 1 of 4