Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIR98593.1 | AIS01953.1 | SGLAU_13005 | SGLAU_30095 | Endonuclease. | Oxidoreductase. | 0.775 |
AIR98593.1 | htpG | SGLAU_13005 | SGLAU_23990 | Endonuclease. | HSP90 family protein. | 0.907 |
AIS00891.1 | AIS01952.1 | SGLAU_24765 | SGLAU_30090 | Two-component system sensor kinase. | Regulatory protein. | 0.896 |
AIS00891.1 | AIS01953.1 | SGLAU_24765 | SGLAU_30095 | Two-component system sensor kinase. | Oxidoreductase. | 0.446 |
AIS00891.1 | gltB | SGLAU_24765 | SGLAU_09180 | Two-component system sensor kinase. | Glutamate synthase [NADPH] large chain. | 0.951 |
AIS00891.1 | guaA | SGLAU_24765 | SGLAU_20560 | Two-component system sensor kinase. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.762 |
AIS00891.1 | htpG | SGLAU_24765 | SGLAU_23990 | Two-component system sensor kinase. | HSP90 family protein. | 0.845 |
AIS00891.1 | prs | SGLAU_24765 | SGLAU_14235 | Two-component system sensor kinase. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.450 |
AIS00891.1 | ribBA | SGLAU_24765 | SGLAU_05805 | Two-component system sensor kinase. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.556 |
AIS01102.1 | AIS01953.1 | SGLAU_25820 | SGLAU_30095 | CoA-disulfide reductase. | Oxidoreductase. | 0.416 |
AIS01102.1 | gltB | SGLAU_25820 | SGLAU_09180 | CoA-disulfide reductase. | Glutamate synthase [NADPH] large chain. | 0.477 |
AIS01102.1 | prs | SGLAU_25820 | SGLAU_14235 | CoA-disulfide reductase. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.755 |
AIS01426.1 | AIS01953.1 | SGLAU_27440 | SGLAU_30095 | Protease. | Oxidoreductase. | 0.442 |
AIS01952.1 | AIS00891.1 | SGLAU_30090 | SGLAU_24765 | Regulatory protein. | Two-component system sensor kinase. | 0.896 |
AIS01952.1 | AIS01953.1 | SGLAU_30090 | SGLAU_30095 | Regulatory protein. | Oxidoreductase. | 0.746 |
AIS01953.1 | AIR98593.1 | SGLAU_30095 | SGLAU_13005 | Oxidoreductase. | Endonuclease. | 0.775 |
AIS01953.1 | AIS00891.1 | SGLAU_30095 | SGLAU_24765 | Oxidoreductase. | Two-component system sensor kinase. | 0.446 |
AIS01953.1 | AIS01102.1 | SGLAU_30095 | SGLAU_25820 | Oxidoreductase. | CoA-disulfide reductase. | 0.416 |
AIS01953.1 | AIS01426.1 | SGLAU_30095 | SGLAU_27440 | Oxidoreductase. | Protease. | 0.442 |
AIS01953.1 | AIS01952.1 | SGLAU_30095 | SGLAU_30090 | Oxidoreductase. | Regulatory protein. | 0.746 |
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