Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ureA-2 | ureAB | SGLAU_32105 | SGLAU_23735 | Urease beta/gamma subunit; Belongs to the urease gamma subunit family. | Urease subunit gamma/beta; In the C-terminal section; belongs to the urease beta subunit family. | 0.999 |
ureA-2 | ureB | SGLAU_32105 | SGLAU_04940 | Urease beta/gamma subunit; Belongs to the urease gamma subunit family. | Urease subunit beta; Belongs to the urease beta subunit family. | 0.995 |
ureA-2 | ureC | SGLAU_32105 | SGLAU_32110 | Urease beta/gamma subunit; Belongs to the urease gamma subunit family. | Urease. | 0.999 |
ureA-2 | ureC1 | SGLAU_32105 | SGLAU_23740 | Urease beta/gamma subunit; Belongs to the urease gamma subunit family. | Urease subunit alpha 1. | 0.999 |
ureA-2 | ureC2 | SGLAU_32105 | SGLAU_04935 | Urease beta/gamma subunit; Belongs to the urease gamma subunit family. | Urease subunit alpha 2. | 0.999 |
ureA-2 | ureD | SGLAU_32105 | SGLAU_04920 | Urease beta/gamma subunit; Belongs to the urease gamma subunit family. | Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.948 |
ureA-2 | ureD2 | SGLAU_32105 | SGLAU_32125 | Urease beta/gamma subunit; Belongs to the urease gamma subunit family. | Urease accessory protein UreD 2; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.976 |
ureA-2 | ureF2 | SGLAU_32105 | SGLAU_32115 | Urease beta/gamma subunit; Belongs to the urease gamma subunit family. | Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.976 |
ureA-2 | ureG1 | SGLAU_32105 | SGLAU_04925 | Urease beta/gamma subunit; Belongs to the urease gamma subunit family. | Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.979 |
ureA-2 | ureG2 | SGLAU_32105 | SGLAU_32120 | Urease beta/gamma subunit; Belongs to the urease gamma subunit family. | Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.988 |
ureAB | ureA-2 | SGLAU_23735 | SGLAU_32105 | Urease subunit gamma/beta; In the C-terminal section; belongs to the urease beta subunit family. | Urease beta/gamma subunit; Belongs to the urease gamma subunit family. | 0.999 |
ureAB | ureB | SGLAU_23735 | SGLAU_04940 | Urease subunit gamma/beta; In the C-terminal section; belongs to the urease beta subunit family. | Urease subunit beta; Belongs to the urease beta subunit family. | 0.989 |
ureAB | ureC | SGLAU_23735 | SGLAU_32110 | Urease subunit gamma/beta; In the C-terminal section; belongs to the urease beta subunit family. | Urease. | 0.999 |
ureAB | ureC1 | SGLAU_23735 | SGLAU_23740 | Urease subunit gamma/beta; In the C-terminal section; belongs to the urease beta subunit family. | Urease subunit alpha 1. | 0.999 |
ureAB | ureC2 | SGLAU_23735 | SGLAU_04935 | Urease subunit gamma/beta; In the C-terminal section; belongs to the urease beta subunit family. | Urease subunit alpha 2. | 0.999 |
ureAB | ureD | SGLAU_23735 | SGLAU_04920 | Urease subunit gamma/beta; In the C-terminal section; belongs to the urease beta subunit family. | Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.940 |
ureAB | ureD2 | SGLAU_23735 | SGLAU_32125 | Urease subunit gamma/beta; In the C-terminal section; belongs to the urease beta subunit family. | Urease accessory protein UreD 2; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.940 |
ureAB | ureF2 | SGLAU_23735 | SGLAU_32115 | Urease subunit gamma/beta; In the C-terminal section; belongs to the urease beta subunit family. | Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.942 |
ureAB | ureG1 | SGLAU_23735 | SGLAU_04925 | Urease subunit gamma/beta; In the C-terminal section; belongs to the urease beta subunit family. | Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.978 |
ureAB | ureG2 | SGLAU_23735 | SGLAU_32120 | Urease subunit gamma/beta; In the C-terminal section; belongs to the urease beta subunit family. | Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.978 |
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