Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS15_0237 | ACS15_0465 | ACS15_0237 | ACS15_0465 | Sporulation related domain protein. | endonuclease/Exonuclease/phosphatase family protein. | 0.482 |
ACS15_0237 | ACS15_1193 | ACS15_0237 | ACS15_1193 | Sporulation related domain protein. | Colicin V production family protein. | 0.627 |
ACS15_0464 | ACS15_0465 | ACS15_0464 | ACS15_0465 | NUDIX domain protein. | endonuclease/Exonuclease/phosphatase family protein. | 0.822 |
ACS15_0464 | ACS15_0467 | ACS15_0464 | ACS15_0467 | NUDIX domain protein. | Coenzyme A transferase family protein; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family. | 0.596 |
ACS15_0464 | aspS | ACS15_0464 | ACS15_0463 | NUDIX domain protein. | aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.761 |
ACS15_0464 | clsB | ACS15_0464 | ACS15_0466 | NUDIX domain protein. | Phospholipase D family protein; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol. | 0.800 |
ACS15_0465 | ACS15_0237 | ACS15_0465 | ACS15_0237 | endonuclease/Exonuclease/phosphatase family protein. | Sporulation related domain protein. | 0.482 |
ACS15_0465 | ACS15_0464 | ACS15_0465 | ACS15_0464 | endonuclease/Exonuclease/phosphatase family protein. | NUDIX domain protein. | 0.822 |
ACS15_0465 | ACS15_0467 | ACS15_0465 | ACS15_0467 | endonuclease/Exonuclease/phosphatase family protein. | Coenzyme A transferase family protein; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family. | 0.608 |
ACS15_0465 | ACS15_1193 | ACS15_0465 | ACS15_1193 | endonuclease/Exonuclease/phosphatase family protein. | Colicin V production family protein. | 0.411 |
ACS15_0465 | ACS15_3560 | ACS15_0465 | ACS15_3560 | endonuclease/Exonuclease/phosphatase family protein. | BON domain protein. | 0.444 |
ACS15_0465 | ACS15_5744 | ACS15_0465 | ACS15_5744 | endonuclease/Exonuclease/phosphatase family protein. | Hypothetical protein. | 0.566 |
ACS15_0465 | aspS | ACS15_0465 | ACS15_0463 | endonuclease/Exonuclease/phosphatase family protein. | aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.460 |
ACS15_0465 | clsB | ACS15_0465 | ACS15_0466 | endonuclease/Exonuclease/phosphatase family protein. | Phospholipase D family protein; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol. | 0.964 |
ACS15_0465 | lptE | ACS15_0465 | ACS15_3024 | endonuclease/Exonuclease/phosphatase family protein. | Lipopolysaccharide-assembly family protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family. | 0.456 |
ACS15_0465 | sufS | ACS15_0465 | ACS15_4987 | endonuclease/Exonuclease/phosphatase family protein. | Cysteine desulfurase, SufS family protein; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. | 0.754 |
ACS15_0467 | ACS15_0464 | ACS15_0467 | ACS15_0464 | Coenzyme A transferase family protein; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family. | NUDIX domain protein. | 0.596 |
ACS15_0467 | ACS15_0465 | ACS15_0467 | ACS15_0465 | Coenzyme A transferase family protein; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family. | endonuclease/Exonuclease/phosphatase family protein. | 0.608 |
ACS15_0467 | clsB | ACS15_0467 | ACS15_0466 | Coenzyme A transferase family protein; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family. | Phospholipase D family protein; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol. | 0.608 |
ACS15_1193 | ACS15_0237 | ACS15_1193 | ACS15_0237 | Colicin V production family protein. | Sporulation related domain protein. | 0.627 |
page 1 of 2