STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS15_1123Periplasmic binding family protein. (420 aa)    
Predicted Functional Partners:
urtC
Urea ABC transporter, permease protein UrtC; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.993
urtB
Urea ABC transporter, permease protein UrtB; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.992
urtD
Urea ABC transporter, ATP-binding protein UrtD.
 
  
 0.991
urtE
Urea ABC transporter, ATP-binding protein UrtE.
 
 
 0.990
ACS15_0567
Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.853
ureD
ureD urease accessory family protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
   
 0.819
ACS15_4650
Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.749
ribE
Riboflavin synthase, alpha subunit.
  
    0.715
ureF
ureF family protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
   
 0.703
ureC
Urease, alpha subunit.
 
   
 0.680
Your Current Organism:
Ralstonia insidiosa
NCBI taxonomy Id: 190721
Other names: CCUG 46789, LMG 21421, LMG:21421, R. insidiosa, Ralstonia insidiosa Coenye et al. 2003 emend. Vaneechoutte et al. 2004, Ralstonia sp. AU2944, Ralstonia sp. KO1, strain AU2944
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