STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS15_1663Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (444 aa)    
Predicted Functional Partners:
ACS15_1662
Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
ACS15_1661
Periplasmic binding family protein.
 
 
 0.991
ACS15_1664
ABC transporter family protein.
  
 0.970
ACS15_1665
ABC transporter family protein.
  
 0.962
ACS15_0920
Branched-chain amino acid transport system / permease component family protein; Overlaps another CDS with the same product name; Belongs to the binding-protein-dependent transport system permease family.
  
 0.860
ACS15_4969
Periplasmic binding family protein.
 
  
 0.853
ACS15_0962
Periplasmic binding family protein.
 
  
 0.845
ACS15_1093
Periplasmic binding family protein.
 
  
 0.845
ACS15_5316
Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.841
ACS15_3643
Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.835
Your Current Organism:
Ralstonia insidiosa
NCBI taxonomy Id: 190721
Other names: CCUG 46789, LMG 21421, LMG:21421, R. insidiosa, Ralstonia insidiosa Coenye et al. 2003 emend. Vaneechoutte et al. 2004, Ralstonia sp. AU2944, Ralstonia sp. KO1, strain AU2944
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