STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS15_2309Na+ symporter family protein. (478 aa)    
Predicted Functional Partners:
ACS15_2308
Hypothetical protein.
 
     0.909
ACS15_1050
Malic enzyme, NAD binding domain protein.
  
  
 0.534
ACS15_3051
Malic enzyme, NAD binding domain protein.
  
  
 0.534
ACS15_2212
Filamentous hemagglutinin family N-terminal domain protein.
  
     0.509
ACS15_1219
Hydrolyase, tartrate beta subunit/fumarate, Fe-S type domain protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.496
ACS15_4151
Putative cellulose synthase BcsB; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
  
     0.459
cysM
Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  
 0.452
ACS15_2310
Aldose 1-epimerase family protein.
       0.425
ACS15_2311
Gram-negative porin family protein.
       0.425
ACS15_5212
Four helix bundle sensory module for signal transduction family protein.
 
   
 0.424
Your Current Organism:
Ralstonia insidiosa
NCBI taxonomy Id: 190721
Other names: CCUG 46789, LMG 21421, LMG:21421, R. insidiosa, Ralstonia insidiosa Coenye et al. 2003 emend. Vaneechoutte et al. 2004, Ralstonia sp. AU2944, Ralstonia sp. KO1, strain AU2944
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