STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS15_2557SPFH domain / Band 7 family protein. (249 aa)    
Predicted Functional Partners:
ACS15_2556
nfeD-like partner-binding domain protein.
 
  
 0.956
hflB
ATP-dependent metallopeptidase HflB family protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.866
ACS15_0351
Zinc peptidase inactive subunit.
  
 0.519
ACS15_0350
Zinc peptidase active subunit; Belongs to the peptidase M16 family.
  
 0.510
hflK
hflK protein; HflC and HflK could encode or regulate a protease.
  
   
 0.487
ACS15_2541
Rhombosortase.
   
 0.486
ACS15_2909
Rhombosortase.
   
 0.486
ACS15_2555
lysR substrate binding domain protein; Belongs to the LysR transcriptional regulatory family.
  
    0.475
ACS15_0014
Hypothetical protein.
  
  
 0.448
rtcA
RNA 3'-phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing.
  
 
 0.448
Your Current Organism:
Ralstonia insidiosa
NCBI taxonomy Id: 190721
Other names: CCUG 46789, LMG 21421, LMG:21421, R. insidiosa, Ralstonia insidiosa Coenye et al. 2003 emend. Vaneechoutte et al. 2004, Ralstonia sp. AU2944, Ralstonia sp. KO1, strain AU2944
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.