STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS15_2653Hypothetical protein. (158 aa)    
Predicted Functional Partners:
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
       0.598
ACS15_5620
merR regulatory family protein.
 
     0.596
ACS15_2651
lysR substrate binding domain protein; Belongs to the LysR transcriptional regulatory family.
       0.424
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.417
Your Current Organism:
Ralstonia insidiosa
NCBI taxonomy Id: 190721
Other names: CCUG 46789, LMG 21421, LMG:21421, R. insidiosa, Ralstonia insidiosa Coenye et al. 2003 emend. Vaneechoutte et al. 2004, Ralstonia sp. AU2944, Ralstonia sp. KO1, strain AU2944
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.