STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS15_3203Transglycosylase SLT domain protein. (166 aa)    
Predicted Functional Partners:
ACS15_3202
Putative signal peptide protein.
       0.684
ACS15_3201
Hypothetical protein.
       0.646
gspD
Type II secretion system protein D.
 
  
 0.623
ACS15_3984
Gram-negative porin family protein.
  
     0.528
ACS15_0848
NUDIX domain protein; Belongs to the Nudix hydrolase family.
  
 
   0.495
ACS15_3447
Transmembrane domain protein.
  
     0.495
fliI
Flagellar protein export ATPase FliI.
  
  
 0.488
ACS15_1166
Hypothetical protein.
  
     0.481
ACS15_4995
Prepilin-type N-terminal cleavage/methylation domain protein.
  
     0.469
ACS15_3048
Barstar family protein.
  
     0.454
Your Current Organism:
Ralstonia insidiosa
NCBI taxonomy Id: 190721
Other names: CCUG 46789, LMG 21421, LMG:21421, R. insidiosa, Ralstonia insidiosa Coenye et al. 2003 emend. Vaneechoutte et al. 2004, Ralstonia sp. AU2944, Ralstonia sp. KO1, strain AU2944
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.