STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaJphenylacetate-CoA oxygenase, PaaJ subunit. (169 aa)    
Predicted Functional Partners:
ACS15_4883
Phenylacetic acid catabolic family protein.
 
 
 0.998
ACS15_4884
Phenylacetic acid degradation B.
 
 
 0.998
ACS15_4885
Phenylacetic acid catabolic family protein.
 
 
 0.998
ACS15_4881
2Fe-2S iron-sulfur cluster binding domain protein.
 
 
 0.997
paaD
Phenylacetic acid degradation protein PaaD.
 
 
 0.986
paaB
Phenylacetate degradation putative enoyl-CoA hydratase PaaB; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.973
paaF
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
  
 0.973
iscU
feS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
  
    0.838
ACS15_4390
3-ketosteroid-9-alpha-hydroxylase reductase subunit.
 
  
 0.814
ACS15_1340
enoyl-CoA hydratase/isomerase family protein.
 
  
 0.763
Your Current Organism:
Ralstonia insidiosa
NCBI taxonomy Id: 190721
Other names: CCUG 46789, LMG 21421, LMG:21421, R. insidiosa, Ralstonia insidiosa Coenye et al. 2003 emend. Vaneechoutte et al. 2004, Ralstonia sp. AU2944, Ralstonia sp. KO1, strain AU2944
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.