STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT86282.1Predicted PurR-regulated permease PerM. (365 aa)    
Predicted Functional Partners:
SIT86277.1
Voltage-gated potassium channel.
 
     0.681
SIT70486.1
Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC.
 
      0.646
SIT86272.1
Uncharacterized conserved protein, DUF2252 family.
       0.459
SIT87948.1
Hypothetical protein.
  
     0.454
purE
5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
    
  0.431
SIT86288.1
Short C-terminal domain-containing protein.
  
     0.400
Your Current Organism:
Microbacterium sp. RU33B
NCBI taxonomy Id: 1907390
Other names: M. sp. RU33B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.