Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIQ44533.1 | SIQ44661.1 | SAMN05880574_11327 | SAMN05880574_11329 | Protein of unknown function. | Hypothetical protein. | 0.709 |
SIQ44533.1 | SIQ44759.1 | SAMN05880574_11327 | SAMN05880574_11332 | Protein of unknown function. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.612 |
SIQ44533.1 | SIQ44791.1 | SAMN05880574_11327 | SAMN05880574_11333 | Protein of unknown function. | Anthranilate synthase, component II. | 0.541 |
SIQ44533.1 | SIQ44831.1 | SAMN05880574_11327 | SAMN05880574_11334 | Protein of unknown function. | Anthranilate synthase component 1. | 0.500 |
SIQ44533.1 | lipB | SAMN05880574_11327 | SAMN05880574_11325 | Protein of unknown function. | Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.675 |
SIQ44533.1 | trpA | SAMN05880574_11327 | SAMN05880574_11326 | Protein of unknown function. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.773 |
SIQ44533.1 | trpB | SAMN05880574_11327 | SAMN05880574_11328 | Protein of unknown function. | Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.709 |
SIQ44533.1 | trpC | SAMN05880574_11327 | SAMN05880574_11331 | Protein of unknown function. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.621 |
SIQ44533.1 | trpF | SAMN05880574_11327 | SAMN05880574_11330 | Protein of unknown function. | Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. | 0.621 |
SIQ44661.1 | SIQ44533.1 | SAMN05880574_11329 | SAMN05880574_11327 | Hypothetical protein. | Protein of unknown function. | 0.709 |
SIQ44661.1 | SIQ44759.1 | SAMN05880574_11329 | SAMN05880574_11332 | Hypothetical protein. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.665 |
SIQ44661.1 | SIQ44791.1 | SAMN05880574_11329 | SAMN05880574_11333 | Hypothetical protein. | Anthranilate synthase, component II. | 0.586 |
SIQ44661.1 | SIQ44831.1 | SAMN05880574_11329 | SAMN05880574_11334 | Hypothetical protein. | Anthranilate synthase component 1. | 0.541 |
SIQ44661.1 | lipB | SAMN05880574_11329 | SAMN05880574_11325 | Hypothetical protein. | Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.621 |
SIQ44661.1 | trpA | SAMN05880574_11329 | SAMN05880574_11326 | Hypothetical protein. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.709 |
SIQ44661.1 | trpB | SAMN05880574_11329 | SAMN05880574_11328 | Hypothetical protein. | Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.773 |
SIQ44661.1 | trpC | SAMN05880574_11329 | SAMN05880574_11331 | Hypothetical protein. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.675 |
SIQ44661.1 | trpF | SAMN05880574_11329 | SAMN05880574_11330 | Hypothetical protein. | Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. | 0.675 |
SIQ44759.1 | SIQ44533.1 | SAMN05880574_11332 | SAMN05880574_11327 | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | Protein of unknown function. | 0.612 |
SIQ44759.1 | SIQ44661.1 | SAMN05880574_11332 | SAMN05880574_11329 | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | Hypothetical protein. | 0.665 |
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