STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ28973.1Acetyltransferase (GNAT) domain-containing protein. (159 aa)    
Predicted Functional Partners:
SIQ28941.1
Peptide/nickel transport system permease protein.
       0.782
SIQ28905.1
Peptide/nickel transport system permease protein.
       0.773
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
    
  0.732
SIQ59320.1
N-acetylglutamate synthase, GNAT family.
  
 
 0.728
ureA
Urease subunit gamma/beta; Belongs to the urease beta subunit family.
  
 
  0.709
SIQ28877.1
Peptide/nickel transport system substrate-binding protein.
       0.678
SIR16433.1
Transcriptional regulator, XRE family with cupin sensor.
  
 
 0.663
SIQ98473.1
tRNA threonylcarbamoyl adenosine modification protein YeaZ.
  
 
 0.581
murA-2
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.492
SIQ29035.1
Glucosamine kinase.
       0.492
Your Current Organism:
Bosea sp. TND4EK4
NCBI taxonomy Id: 1907408
Other names: B. sp. TND4EK4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.