STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC52531.1WGR domain-containing protein, predicted DNA-binding domain in MolR. (81 aa)    
Predicted Functional Partners:
SMD00182.1
Replication initiation protein RepC.
  
     0.645
SMC54625.1
Replication initiation protein RepC.
  
     0.638
SMC93400.1
Replication initiation protein RepC.
  
     0.631
SMC71218.1
Replication initiation protein RepC.
  
     0.629
SMD12907.1
Replication initiation protein RepC.
  
     0.627
SMD19426.1
Integrase core domain-containing protein.
  
     0.568
SMD00157.1
Chromosome partitioning protein.
  
     0.549
SMD12914.1
Plasmid partitioning protein RepA.
  
     0.532
SMC54545.1
Chromosome partitioning protein.
  
     0.524
SMC71195.1
Chromosome partitioning protein.
  
     0.518
Your Current Organism:
Rhizobium sp. RU36D
NCBI taxonomy Id: 1907415
Other names: R. sp. RU36D
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