STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR07783.1MFS transporter, OPA family, glycerol-3-phosphate transporter. (447 aa)    
Predicted Functional Partners:
SIQ03009.1
Putative spermidine/putrescine transport system substrate-binding protein.
  
  
 0.644
SIP95830.1
Two-component system, NarL family, sensor histidine kinase UhpB.
 
 
 0.563
SIR07819.1
Transcriptional regulator, DeoR family.
     
 0.550
SIQ01629.1
Glycerol 3-phosphate dehydrogenase (quinone) subunit B.
 
    0.517
SIQ87145.1
Chorismate mutase.
   
 
 0.479
SIQ01658.1
Glycerol 3-phosphate dehydrogenase (quinone) subunit A.
 
  
 0.471
SIR07857.1
Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.469
SIR07750.1
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
  
 0.465
SIP99576.1
MIP family channel proteins; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
  
 0.459
SIP91284.1
Glycerol kinase; Belongs to the FGGY kinase family.
  
  
 0.448
Your Current Organism:
Aeromonas sp. RU39B
NCBI taxonomy Id: 1907416
Other names: A. sp. RU39B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.