STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR36182.1Thioredoxin-related protein. (157 aa)    
Predicted Functional Partners:
SIQ60991.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.966
SIQ13441.1
T1SS-143 domain-containing protein.
    
 
 0.882
SIR44879.1
Hypothetical protein.
    
 
 0.882
SIR55072.1
MSHA biogenesis protein MshQ.
    
 
 0.882
SIR13578.1
Enterochelin esterase.
    
 
 0.872
SIQ61425.1
Cytochrome bo3 quinol oxidase subunit 4.
    
 
 0.845
SIQ60675.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
    
 0.794
SIQ54767.1
acyl-CoA thioesterase-1.
   
 
 0.708
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
    
  0.667
SIR36213.1
Asparagine synthase (glutamine-hydrolysing).
       0.636
Your Current Organism:
Aeromonas sp. RU39B
NCBI taxonomy Id: 1907416
Other names: A. sp. RU39B
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.