STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900128495_02590Unannotated protein. (131 aa)    
Predicted Functional Partners:
GCA_900128495_02589
Unannotated protein.
  
  
 0.967
GCA_900128495_01938
Unannotated protein.
  
  
 0.885
GCA_900128495_02591
Unannotated protein.
 
     0.862
GCA_900128495_00148
Unannotated protein.
   
  
 0.831
GCA_900128495_00150
Unannotated protein.
   
  
 0.826
GCA_900128495_00145
Unannotated protein.
   
    0.825
GCA_900128495_00149
Unannotated protein.
   
  
 0.803
GCA_900128495_00259
Unannotated protein.
  
    0.781
GCA_900128495_00296
Unannotated protein.
   
    0.780
GCA_900128495_01454
Unannotated protein.
  
    0.748
Your Current Organism:
Bacteroides ilei
NCBI taxonomy Id: 1907658
Other names: B. ilei, Bacteroides sp. Marseille-P3208, CCUG 69964, CSUR P3208, strain Marseille-P3208
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.