STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOZ11322.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (80 aa)    
Predicted Functional Partners:
AOZ13897.1
Homoserine dehydrogenase; Catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.835
metG
methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.833
AOZ12668.1
Methionine adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.770
AOZ12080.1
5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.759
AOZ12715.1
Methylenetetrahydrofolate reductase [NAD(P)H]; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.719
AOZ14085.1
Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.709
AOZ13171.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.707
AOZ12792.1
Thymidylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.682
AOZ11768.1
GAF domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.672
AOZ14057.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.651
Your Current Organism:
Pseudomonas sp. BS2016
NCBI taxonomy Id: 1907766
Other names: P. sp. BS-2016, Pseudomonas sp. AU11048, Pseudomonas sp. BS-2016
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