STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOZ12028.1EstA family serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)    
Predicted Functional Partners:
AOZ12124.1
Glutamine-hydrolyzing GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.770
AOZ15122.1
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.640
AA042_06805
Lytic murein transglycosylase B; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.592
AOZ12029.1
Beta-agarase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.584
AOZ12026.1
Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.558
AOZ13288.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.534
AOZ12027.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.530
AOZ12530.1
anhydro-N-acetylmuramic acid kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.520
AOZ11664.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.517
AOZ12751.1
Monofunctional biosynthetic peptidoglycan transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.515
Your Current Organism:
Pseudomonas sp. BS2016
NCBI taxonomy Id: 1907766
Other names: P. sp. BS-2016, Pseudomonas sp. AU11048, Pseudomonas sp. BS-2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.