STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOZ12380.1Thiamine-phosphate diphosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)    
Predicted Functional Partners:
AOZ12379.1
Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
AOZ12748.1
Thiazole synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.994
AOZ13380.1
Phosphomethylpyrimidine synthase ThiC; Catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.985
AOZ12749.1
Sulfur carrier protein ThiS; With ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.963
AOZ12381.1
Glutamate-1-semialdehyde-2,1-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.872
AOZ12463.1
Thiamine-phosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.834
AOZ13717.1
Molybdopterin-synthase adenylyltransferase MoeB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.803
AOZ13397.1
Ribosome biogenesis GTPase RsgA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.720
AOZ11462.1
Ribokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.699
AOZ13230.1
tRNA 4-thiouridine(8) synthase ThiI; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.565
Your Current Organism:
Pseudomonas sp. BS2016
NCBI taxonomy Id: 1907766
Other names: P. sp. BS-2016, Pseudomonas sp. AU11048, Pseudomonas sp. BS-2016
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