STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOZ12981.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (532 aa)    
Predicted Functional Partners:
AOZ12980.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.994
AOZ12982.1
Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.987
AOZ12838.1
Taurine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.979
AOZ12832.1
Aliphatic sulfonates ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.976
tauB
Part of the ABC transporter complex tauABC involved in taurine import; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.972
AOZ13151.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.945
AOZ11435.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.932
AOZ12834.1
Alkanesulfonate monooxygenase, FMNH(2)-dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.879
AA042_01185
Manganese ABC transporter ATP-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.832
AOZ14032.1
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.829
Your Current Organism:
Pseudomonas sp. BS2016
NCBI taxonomy Id: 1907766
Other names: P. sp. BS-2016, Pseudomonas sp. AU11048, Pseudomonas sp. BS-2016
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