STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOZ13141.1Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)    
Predicted Functional Partners:
AOZ13783.1
Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
putA
Proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.898
AA042_03795
Aminodeoxychorismate synthase, component I; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.890
AOZ12514.1
Translation elongation factor G; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.836
AOZ11834.1
Protein-tyrosine-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.835
AOZ14355.1
Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.777
AOZ13621.1
Transcriptional repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.773
AOZ14385.1
RNA polymerase sigma factor FliA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.763
AOZ14360.1
Flagellar cap protein FliD; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.761
AOZ11965.1
Chaperonin GroL; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.760
Your Current Organism:
Pseudomonas sp. BS2016
NCBI taxonomy Id: 1907766
Other names: P. sp. BS-2016, Pseudomonas sp. AU11048, Pseudomonas sp. BS-2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.