STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOZ14046.1CsbD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (63 aa)    
Predicted Functional Partners:
AOZ13642.1
Phospholipid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.902
AOZ12862.1
DUF1328 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.901
AOZ11291.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.803
AOZ11757.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.803
AOZ13447.1
Bacterioferritin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.719
AOZ11662.1
GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.703
AOZ12211.1
Phospholipid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.690
AOZ12801.1
Dodecin flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.674
AOZ11601.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.665
AOZ14047.1
Ribonuclease BN; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.659
Your Current Organism:
Pseudomonas sp. BS2016
NCBI taxonomy Id: 1907766
Other names: P. sp. BS-2016, Pseudomonas sp. AU11048, Pseudomonas sp. BS-2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.