STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOZ14763.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)    
Predicted Functional Partners:
AOZ11542.1
Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.822
AOZ13074.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.538
AOZ13354.1
Catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.533
AOZ14764.1
Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.527
AOZ11444.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.515
AOZ14085.1
Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.503
AA042_02020
Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.489
AOZ12940.1
Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.482
AOZ13919.1
Phosphoenolpyruvate carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.481
lldD
Alpha-hydroxy-acid oxidizing enzyme; Flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.410
Your Current Organism:
Pseudomonas sp. BS2016
NCBI taxonomy Id: 1907766
Other names: P. sp. BS-2016, Pseudomonas sp. AU11048, Pseudomonas sp. BS-2016
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