STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOZ14844.1Creatininase; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)    
Predicted Functional Partners:
AOZ12615.1
Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.934
AA042_08090
Sarcosine oxidase subunit delta; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.855
AOZ15072.1
Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.842
AOZ11576.1
Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.772
AOZ12125.1
IMP dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.626
AOZ13145.1
CDP-6-deoxy-delta-3,4-glucoseen reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.578
AOZ14507.1
NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.578
AOZ14071.1
Peptidase M14; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.538
AOZ13294.1
3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.512
AOZ11833.1
UDP-N-acetylenolpyruvoylglucosamine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.502
Your Current Organism:
Pseudomonas sp. BS2016
NCBI taxonomy Id: 1907766
Other names: P. sp. BS-2016, Pseudomonas sp. AU11048, Pseudomonas sp. BS-2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.