STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLT96522.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)    
Predicted Functional Partners:
OLT96521.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.990
OLT96520.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.964
OLT95728.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.925
OLT95650.1
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.925
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
 0.809
OLT96523.1
beta-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.791
OLT94197.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.765
OLT96524.1
Enoyl-[acyl-carrier-protein] reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.743
OLT88055.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.721
OLT95965.1
Cobaltochelatase subunit CobN; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.706
Your Current Organism:
Mycobacterium syngnathidarum
NCBI taxonomy Id: 1908205
Other names: ATCC TSD-89, DSM 105112, M. syngnathidarum, Mycobacterium sp. 24999, Mycobacterium sp. 27335, strain 27335
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.