STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLT93240.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)    
Predicted Functional Partners:
OLT93200.1
Glutathione peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutathione peroxidase family.
       0.778
OLT91492.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.760
OLT85628.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.755
OLT93201.1
DUF2334 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.569
purC
Phosphoribosylaminoimidazolesuccinocarboxamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SAICAR synthetase family.
       0.554
OLT93199.1
PtrB; oligopeptidase that cleaves peptide bonds following arginine and lysine residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.554
OLT93202.1
FAD-binding dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.504
OLT93197.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.418
Your Current Organism:
Mycobacterium syngnathidarum
NCBI taxonomy Id: 1908205
Other names: ATCC TSD-89, DSM 105112, M. syngnathidarum, Mycobacterium sp. 24999, Mycobacterium sp. 27335, strain 27335
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.