STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEN48_15535Uncharacterized protein. (299 aa)    
Predicted Functional Partners:
BEN48_13710
Cell surface protein SprA.
  
     0.771
BEN48_16265
Uncharacterized protein.
  
     0.769
BEN48_01340
Uncharacterized protein.
  
     0.738
BEN48_11475
Uncharacterized protein.
  
     0.730
BEN48_14950
Uncharacterized protein.
  
     0.730
BEN48_15540
Phosphopantothenoylcysteine decarboxylase.
       0.718
BEN48_13205
OMP_b-brl_2 domain-containing protein.
  
     0.702
BEN48_15550
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
     0.636
BEN48_15605
Uncharacterized protein.
  
     0.633
BEN48_11275
Uncharacterized protein.
  
     0.631
Your Current Organism:
Hymenobacter glacialis
NCBI taxonomy Id: 1908236
Other names: CCM 8648, H. glacialis, Hymenobacter glacialis Sedlacek et al. 2017, Hymenobacter sp. CCM 8648, LMG 29440, LMG:29440, strain P5086
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.