STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001936575_04033Unannotated protein. (348 aa)    
Predicted Functional Partners:
GCA_001936575_00870
Unannotated protein.
  
 0.983
GCA_001936575_02295
Unannotated protein.
  
 0.983
GCA_001936575_04481
Unannotated protein.
    
 0.948
GCA_001936575_04475
Unannotated protein.
 
 
0.925
GCA_001936575_01387
Unannotated protein.
  
 0.918
GCA_001936575_01135
Unannotated protein.
   
 0.900
GCA_001936575_01625
Unannotated protein.
  
 
 0.895
GCA_001936575_02293
Unannotated protein.
   
 0.891
GCA_001936575_01626
Unannotated protein.
  
 0.887
GCA_001936575_00347
Unannotated protein.
  
 
 0.845
Your Current Organism:
Tenacibaculum agarivorans
NCBI taxonomy Id: 1908389
Other names: KCTC 52476, MCCC 1H00174, T. agarivorans, Tenacibaculum agarivorans Xu et al. 2017, Tenacibaculum sp. HZ1, strain HZ1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.