STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900103085_00622Unannotated protein. (458 aa)    
Predicted Functional Partners:
GCA_900103085_01237
Unannotated protein.
    
  0.867
GCA_900103085_01506
Unannotated protein.
    
  0.866
GCA_900103085_00280
Unannotated protein.
    
  0.865
GCA_900103085_01302
Unannotated protein.
  
 
  0.865
GCA_900103085_01979
Unannotated protein.
    
  0.864
GCA_900103085_00457
Unannotated protein.
    
  0.823
GCA_900103085_00612
Unannotated protein.
  
 
  0.820
GCA_900103085_01303
Unannotated protein.
  
     0.656
GCA_900103085_00830
Unannotated protein.
   
 
  0.536
GCA_900103085_01430
Unannotated protein.
   
  0.530
Your Current Organism:
Gilliamella mensalis
NCBI taxonomy Id: 1908520
Other names: DSM 104442, G. mensalis, Gilliamella mensalis Praet et al. 2017, Gilliamella sp. LMG 29880, Gilliamella sp. R-54852, LMG 29880, LMG:29880, strain R-54852
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.