STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANW25627.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (88 aa)    
Predicted Functional Partners:
ANW22862.1
Type VI secretion system-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.873
ANW22864.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.865
ANW22860.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.860
ANW22863.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.859
ANW25628.1
Type VI secretion system-associated lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.796
ANW22858.1
VgrG protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.723
ANW22861.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.691
BA953_00810
Protein ImpG/VasA; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.618
ANW22855.1
Type VI secretion system-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.565
BA953_00795
Type VI secretion protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.553
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.