STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANW22896.1Secretion protein EspA; Derived by automated computational analysis using gene prediction method: Protein Homology. (191 aa)    
Predicted Functional Partners:
ANW22900.1
Pathogenicity island effector protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.942
ANW22926.1
Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.862
ANW22887.1
EscD/YscD/HrpQ family type III secretion system inner membrane ring protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.832
ANW22899.1
Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.820
ANW22901.1
Type III secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.747
ANW22898.1
CesD/SycD/LcrH family type III secretion system chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.715
ANW22897.1
Secretion protein EspA; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
0.678
ANW23032.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.621
ANW24969.1
TIGR03503 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.621
ANW22923.1
EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.523
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
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