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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANW23184.1Arginine:ornithine antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (472 aa)    
Predicted Functional Partners:
arcA
Arginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.812
arcA-2
Arginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.812
arcC
Carbamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbamate kinase family.
 
  
 0.716
treC
Alpha,alpha-phosphotrehalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.656
ANW26253.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.656
ANW26254.1
Maltodextrin glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.
    
 0.656
ANW26317.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.656
ANW26801.1
Sugar phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.656
ANW27075.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.656
ANW27392.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.656
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
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