STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANW23216.1Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)    
Predicted Functional Partners:
ANW23306.1
YgiQ family radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.911
ANW26387.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.899
ppk2
Polyphosphate kinase 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.838
ANW23215.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.806
ANW23217.1
Coenzyme A pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.668
ANW23219.1
L-serine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family.
  
    0.514
ANW26110.1
IMP dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.492
BA953_01090
Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.482
ANW25531.1
Peptidase M19; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.482
ANW27354.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.445
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.