STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANW23314.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)    
Predicted Functional Partners:
ANW23313.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.821
ANW23315.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.756
ANW23312.1
DNA transformation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.732
ANW23316.1
Glutamate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.680
ANW23317.1
Transcriptional regulator HexR; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.628
BA953_03350
Alcohol dehydrogenase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.506
ANW24469.1
Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.
  
    0.490
ANW25221.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.451
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
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