STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANW23347.1Ribosomal-protein-serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)    
Predicted Functional Partners:
ANW26458.1
ribosomal-protein-L7/L12-serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.765
ANW23208.1
Ribosomal-protein-alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.706
ANW23119.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.678
ANW26684.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.671
ANW23346.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.645
mfd
Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
  
    0.554
ANW23344.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.539
ANW23348.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.496
ANW26566.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.462
ANW25158.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.461
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.