Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANW23617.1Deferrochelatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)    
Predicted Functional Partners:
ANW26461.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.840
ANW23618.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.794
ANW23616.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
     
 0.751
ANW24381.1
Protoporphyrinogen oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.661
ANW23621.1
Cytochrome c nitrate reductase biogenesis protein NrfE; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.588
ANW23620.1
Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.545
nrfD
Cytochrome c nitrite reductase subunit NrfD; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.539
nrfC
Cytochrome c nitrite reductase Fe-S protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.539
ANW23623.1
Cytochrome c nitrite reductase pentaheme subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.539
rumA
23S rRNA (uracil(1939)-C(5))-methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.
 
      0.539
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.