Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nrfCCytochrome c nitrite reductase Fe-S protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)    
Predicted Functional Partners:
ANW22840.1
Formate dehydrogenase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.980
torA
Trimethylamine N-oxide reductase I catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.976
ANW22838.1
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.966
nrfD
Cytochrome c nitrite reductase subunit NrfD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.965
ANW23623.1
Cytochrome c nitrite reductase pentaheme subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.950
napA
Nitrate reductase catalytic subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 0.917
ANW25938.1
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.903
ANW23621.1
Cytochrome c nitrate reductase biogenesis protein NrfE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.869
ANW23619.1
Cytochrome c biogenesis protein CcmH; Possible subunit of a heme lyase.
  
    0.862
ANW23620.1
Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.861
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
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