Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANW23711.1Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)    
Predicted Functional Partners:
ANW26600.1
Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.749
ANW23710.1
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.545
ANW23713.1
AlpA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.528
ANW25676.1
Recombinase XerC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.522
ANW23166.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.509
ANW26980.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.509
ANW25675.1
Restriction endonuclease subunit S; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.471
ANW23712.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.465
BA953_05450
Type I restriction endonuclease; Frameshifted; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.437
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
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