STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANW23711.1Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)    
Predicted Functional Partners:
ANW26600.1
Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.749
recA
Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
   
  
 0.624
ANW23713.1
AlpA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.546
ANW23710.1
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.544
ANW25676.1
Recombinase XerC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.529
fur-2
Transcriptional repressor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family.
      
 0.512
ANW26378.1
Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family.
      
 0.512
ANW23166.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.506
ANW26980.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.506
ANW25675.1
Restriction endonuclease subunit S; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.485
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
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