Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ANW23875.1Pilus assembly protein PilZ; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. (123 aa)    
Predicted Functional Partners:
ANW25057.1
Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.811
ANW23876.1
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.792
ANW26618.1
Chemotaxis protein CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
    
   0.782
ANW23874.1
Energy-dependent translational throttle protein EttA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.734
ANW23551.1
Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.728
ANW22992.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.718
ANW23873.1
Lytic murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.660
trpR
Trp operon repressor; This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription.
       0.650
ANW24662.1
MSHA biogenesis protein MshO; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.634
ANW24650.1
MSHA biogenesis protein MshJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.597
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
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