Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANW23609.1 | ANW24033.1 | BA953_04895 | BA953_07275 | Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.824 |
| ANW24033.1 | ANW23609.1 | BA953_07275 | BA953_04895 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.824 |
| ANW24033.1 | ANW24037.1 | BA953_07275 | BA953_07295 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.826 |
| ANW24033.1 | ANW27151.1 | BA953_07275 | BA953_23825 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.833 |
| ANW24033.1 | BA953_24360 | BA953_07275 | BA953_24360 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.823 |
| ANW24033.1 | ptsN | BA953_07275 | BA953_07285 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PTS IIA-like nitrogen-regulatory protein PtsN; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.877 |
| ANW24033.1 | raiA-2 | BA953_07275 | BA953_07280 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.829 |
| ANW24033.1 | rpoA | BA953_07275 | BA953_07485 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.899 |
| ANW24033.1 | rpoB | BA953_07275 | BA953_10400 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.884 |
| ANW24033.1 | rpoC | BA953_07275 | BA953_10405 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.883 |
| ANW24033.1 | rpoZ | BA953_07275 | BA953_08425 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.867 |
| ANW24037.1 | ANW24033.1 | BA953_07295 | BA953_07275 | Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.826 |
| ANW24037.1 | ptsN | BA953_07295 | BA953_07285 | Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | PTS IIA-like nitrogen-regulatory protein PtsN; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.992 |
| ANW24037.1 | raiA-2 | BA953_07295 | BA953_07280 | Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.846 |
| ANW27151.1 | ANW24033.1 | BA953_23825 | BA953_07275 | Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.833 |
| BA953_24360 | ANW24033.1 | BA953_24360 | BA953_07275 | Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.823 |
| ptsN | ANW24033.1 | BA953_07285 | BA953_07275 | PTS IIA-like nitrogen-regulatory protein PtsN; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.877 |
| ptsN | ANW24037.1 | BA953_07285 | BA953_07295 | PTS IIA-like nitrogen-regulatory protein PtsN; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.992 |
| ptsN | raiA-2 | BA953_07285 | BA953_07280 | PTS IIA-like nitrogen-regulatory protein PtsN; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.974 |
| raiA-2 | ANW24033.1 | BA953_07280 | BA953_07275 | Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.829 |
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