Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ANW24324.1Repressor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S24 family. (222 aa)    
Predicted Functional Partners:
ANW22830.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.837
ANW24325.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
 
  
 0.836
srkA
Stress response serine/threonine protein kinase YihE; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response.
 
     0.549
ANW24323.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.537
ANW24321.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.503
ANW24322.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.503
ANW24316.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.477
ANW24317.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.477
ANW24318.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.477
ANW24319.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.477
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
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