STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANW24562.1MSHA biogenesis protein MshA; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)    
Predicted Functional Partners:
ANW24655.1
MSHA biogenesis protein MshE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.972
ANW26803.1
MSHA biogenesis protein MshA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.928
ANW24662.1
MSHA biogenesis protein MshO; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.815
ANW24650.1
MSHA biogenesis protein MshJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.808
epmB
EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.807
ANW24652.1
Pilus (MSHA type) biogenesis protein MshL; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.805
ANW24661.1
MSHA biogenesis protein MshD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.778
gspJ
Type II secretion system protein GspJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.757
ANW24656.1
MSHA biogenesis protein MshG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.743
ANW24260.1
General secretion pathway protein GspK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.739
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.