STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANW25016.1Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)    
Predicted Functional Partners:
ANW25902.1
Chitin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.699
ANW23539.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.665
ANW26177.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.661
ANW26454.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.628
ANW26172.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.618
ANW25129.1
LafE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.610
ANW26025.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.606
ANW23379.1
Spindolin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.599
ANW25053.1
Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.591
tolB
Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
 
 0.583
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.