Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
ANW25247.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)    
Predicted Functional Partners:
RrmA
23S rRNA (guanine(745)-N(1))-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.774
ANW25246.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.726
ANW25250.1
D-hexose-6-phosphate mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glucose-6-phosphate 1-epimerase family.
       0.623
ANW25249.1
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.487
ANW24113.1
Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.465
ANW27059.1
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.464
hmuV
Heme ABC transporter ATP-binding protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
  
  
 0.461
ANW24763.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.444
ANW26842.1
DUF1566 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.444
ANW27139.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.418
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
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