STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANW25297.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)    
Predicted Functional Partners:
ANW24131.1
3-phenylpropionic acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.825
ANW25726.1
NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.775
ANW23111.1
Beta-phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.652
ANW27318.1
Carotenoid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.652
ANW27073.1
Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.652
ANW25298.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.520
ANW22771.1
Sugar-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.514
obgE
GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
 
      0.481
ANW23090.1
Sporulation control protein Spo0M; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.441
ANW26251.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.416
Your Current Organism:
Vibrio coralliilyticus
NCBI taxonomy Id: 190893
Other names: ATCC BAA-450, CAIM 616, LMG 20984, LMG:20984, V. coralliilyticus, Vibrio coralliilyticus Ben-Haim et al. 2003, Vibrio corallilyticus, Vibrio coralyticus, Vibrio sp. LMG 10953, strain YB1
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